Chair in Computational Neuroscience, Faculty of Science, School of Psychology, Nottingham
#13: Mark Humphries – Basal Ganglia Models, Highs and Lows in the Brain and… how does DBS work?
It was a tremendous privilege to pick Mark Humphrey’s brain who has insight about broad domains of the brain like few others. His new book The Spike: An Epic Journey Through the Brain in 2.1 Seconds takes us on a journey through the brain starting at the retina and ending in the spinal cord. As we follow spikes along, we learn how information is processed in the brain, but also how it’s simply lost and forgotten. Mark has done his PhD with Kevin Gurney, who together with Tony Prescott and Peter Redgrave has published an influential computational model of the basal ganglia in 2001. We disentangle how it differs from the Albin-DeLong model, talk about implications for whole-brain computational models and the mechanism of action of DBS. Based on a twitter thread that Mark once published about the Wishaw decorticate rat experiments, I ask him: Does the brain even need the cortex? Finally, we touch about compression of data and his recent paper about a weak and strong principle of dimensionality reduction of the brain.
00:00strongly suggesting that the activity when you're looking at nothing, a grey screen,or even your eyes closed, is very similar to the activity when their eyes are open,which suggests that most of the activity is actually not then encoding stuff that's coming in,but also is doing some ongoing processing. And the ongoing processing, the best guess is whatit's doing is just simply predicting the features that are going to be there. Eachlayer is predicting what the layer below it should be sending it to. And so V2 should be predictingthe element edges of these to be seen from the fact that it's predicting these lines.V4 should be predicting these lines and these corners to be to to to to to to to to to toseeing the outlines of these objects and so on up so down the hierarchy well it actually is isthen just difference between what's coming down and what's coming up from the retinaso what's being passed forward is the thing that needs to be tweaked in the predictionswelcome to stimulating brains01:12so hello there and welcome back to stimulating brains episode number 13this time together with mark humphries who is the chair in computational neuroscienceof the faculty of science at the school of psychology nottingham uk mark has just publisheda book called the spike an epic journey through the brain in 2.1 seconds with princeton universitypress which is a highly recommended read it's really entertaining it's also easy to read i'dsay and still very informing and beyond talking about that book of course mark and i talk abouta new paper he just published on two principles of dimensionality reduction in the brain and02:03going back a bit further in time also about his phd work together with kevin gurney who of coursetogether with prescott and redgraveyoudeveloped one of the most influential computational basal ganglia models in 2001we also have a slight detour in there about the question do you even need the cortex in the brainand yeah it was a great privilege to be able to pick mark's brain i think his work is reallyexcellent and outstanding and i'm pretty sure you're gonna like the conversation we hadso um thanks for tuning in once more stimulating brains episode 13 have funto to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to03:12what private time I have away from from yeah um doing research and obviously a family with youngkids so in that smidgen of time yeah um I it gets split mostly between between sort of traditionalacademic pursuits of reading a hell of a lot of stuff that is not anything to do with what Iresearch um so I just love writing and also I read all novels of all stripes um and uh non-fictionof all kinds of history and science and so on particularly love evolution oh great stuff soI'm not quite sure why I didn't end up being um an evolutionary theorist because I've spent my entireteenage years reading Stephen Jay Gould and Richard Dawkins books and thinking wow theoretical evolutionis great um well ended up being a computational neuroscientist instead um and uh and the other04:03pursuit mostly of music so a lot of play guitar oh great um uh historically in a bunch of uh fairly ummediocre bands of various kinds but these days mostly just for fun in fact we share that Ialso played in mediocre bands all my younger years yeah has gotten much less um do you have any goodrecommendations for evolutionary books to read for us that's a good question um I have to say Irecently reread Richard Dawkins blind watchmaker and it's still amazing it's great yeah umto to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to05:12too, I don't know, sort of committed to the argument. It's kind of goes, it goes really strong.But as a blind watchmaker is much more nuanced, it's much more, takes you much more into thehighways and byways of the arguments about sort of the deep thinking of evolutionary theory, abouthow genes are the element of evolution and what that means in terms of both phenotype and interms of what we would, how things came to be evolved. He spent a lot of time in the blindwatchmaker, of course, talking about how complex things appeared, given this, we think of this,the unit of hereditary and that of evolution is the gene. How on earth did you end up with,you know, eyeball and stuff? So that he spent a lot of time on that,that this sort of big evolution questions. Great. I also liked that. I don't know the06:00English title with the rainbow, something rainbow. I think it's the positive,opposite.Of the selfish gene that he wrote in response to making a more positive claim and things.On weaving the rainbow, I think.On weaving the rainbow. Yeah. Yeah. Rainbow. Yeah. That, that I really liked as well.Anyways. We're not here to talk about Richard Dawkins, unfortunately, but about neuroscience,I guess. And you've done exceptional work in the field of computational neuroscience, maybe eventheoretical neuroscience. I don't know if you would identify with that a bit. Would you mindtelling us a bit about your broad take at research and what your lab's focus is? Is that even possible?It's a good question to ask of any computational neuroscientist, because so many of us have,don't have a focus as much as a sort of bunch of things that we like to do and find problems thatwe like to apply them to. So for my lab, so the bulk of what my lab does is focus generally on07:03the problem of how populations of neurons do what they do, take the data, and then they do what theydo to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to towhat they do and we do that in a sense of analyzing lots of data as opposed to building models ofneural sort of neural computation these days um so i often tell people we're a neural data labso we obviously we're computational neuroscientists but we take experimental dataum to answer questions about how populations of neurons encode things or what we can decode fromthem and the dynamics they have when they are encoding these things uh and because we're08:02interested in that as a general problem we don't focus on a specific brain region or a specificspecies so we have worked on things ranging from um uh sort of encoding of the present and the pastin prefrontal cortex in rats to the encoding of um encoding of the galloping escape movementin the ceaselagoplysia uh in its in its motor centers in the pedal ganglion circleand you recently lookedat 10 000 neurons uh simultaneously recorded from the stringer uh carsten stringer data as well rightso so it's also a lot about high volume data these days or is that true yeah so we've um we have lookedat data sets on that scale from um some data from carol's servotas lab where they've a slightlyearlier data set than the stringer data where they recorded from um pretty much every single neuron09:00in a single barrel of the barrel cortex on the stringer data set and then we've looked at theuh mouse um so the so simultaneously they recorded a maximum of about sort of 1700 simultaneouslyokay but when they patch stitched recordings together they meant basically they're recordedfrom every neuron in layers two three and four of the um of the barrel cortex which is a prettyexhaustive uh survey of a tiny chunk of tissue um but in this case of this particular mouse it's theuh barrel corresponding to the only whisker that it had intact on its face so all sensoryinformation from the from the whisker was being passed to the mouse and then the mouse was beingrecorded from the brain and then the mouse was being recorded from the brain and then the mouse wasbeing recorded from the brain and then the mouse was being recorded from the brain and then theneurons so whatever those neurons knew the rest of the brain knew which is great sort of bottleneckto ask all sorts of key questions about yeah yeah that sounds good so um but and we'll dive intothat more but maybe to go back a bit in time you recently published a retrospective look back paperon the gurney prescott redgrave model of the basal ganglia um from 2001 together with kevingurney and in it you wrote on the first day of my phd in october i was a professor at the10:02university of the basal ganglia and i was a professor at the university of the basal gangliain october 1998 i was handed a thick 51 page report held between covers of pale blue card on whichwere printed the ominous words analysis and simulation of a model of the basal gangliawhat was that about in the beginning of your phd so yes so the bit i missed off the answer to yourquestion about what my lab does is um we also i am historically a bottom model of the basic angleso i spent a lot of time building computation models of that chunk of the brainand that report i was handed the first day my phd was so my supervisor kevin gurney had literally asi started just finished his what had taken him i think three four years of building this model ofthe basal ganglia which realized this theory that the basal ganglia to collectively do some form ofselection um between competing inputs and in particular that they solve the problem of action11:02to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to toin the context of action selection.So that's the first paper was saying,okay, we start from all this informationand we distill it down into a sort of a wiring diagramthat says this wiring diagram looks as thoughit should be able to do some form of action selection.Question is, does it?So that's the whole point of being a modeleris that you take that wiring diagram,build a model of it, and then you show does it or doesn't it,and what exciting things pop up along the waythat you weren't expecting.12:00So the second half of the report is this modelin a simple sort of population level dynamic model,which is then analyzed for all of its sort of stabilityand selection properties and then stimulated towards the end.So it's particularly the page after page after pageof the sort of the analysis stuffthat at the start of my PhD completely lost me.I imagine, yeah. Yes.So another famous model of the Baselgangliais of course the one by Gerrit Alexander,Marlon DeLong and Peter Strick from around 1986,or I think more frequently now people refer to itas the Albin DeLong model from 1990.As the younger students of the Baselgangliaweren't there at the time,so it's sometimes hard in retrospect to even understand,you know, what each model added.So could you maybe help us disentangle the two?What was new in the Gurney-Prescott-Redgrave model,and how did you find it?And how do they differ?Or did it build upon that?13:01Yeah.So the original sort ofdirect indirect pathway model, as you say,has this sort of tangled history of a few papers.And if you go back and read them, there's no one paperwhere she clearly says this model is.Yeah.It sort of emerged out of those sort of collection of papers.There wasMarlon DeLong's sort of tinned paperand the Christian Alexander one in the same issue,which the kind of 1990 sort of formalized this.I'll say they were justwiring diagrams.And they were also quite simplified wiring diagrams.They had knowingly emitted some stuffjust to sort of get a view of the world that wasyou could think through in your head.And the key aspect they were emphasizing in that modelwas obviously that you have two pathwaysthat go from the striatum to the output nuclei of the vasocanglia.So one population of the striatum sends this direct projectionto the upper nuclei.So you've got direct projection neurons to the upper nuclei.And the other one goes via some intermediary nuclei.And the way they originally drew the14:01indirect pathway, they have a sort ofthree silencers, two regions interposed.So they have the population of the striatum projection to the glos pallidus,glos pallidus projection to the subthymine nucleus,subthymine nucleus projection to the radiculata.So you have thisindirect pathway reading up with a direct pathway.And so one question you want to, you know,when we build models is just to ask the question,when we build models is just to ask the question,when we build models is just to ask the question,well, you say that works, but does it?Sure.And the answer is when you build a model of that actual pathway,it doesn't do what they think it does.One reason for that being that the entire control of the indirect pathwayrelies on the, if you just add up the signs in your head,you have this inhibition from striatum inhibiting the glos pallidus,which itself is inhibitory.So you turn up the striatum, you turn down the glos pallidus,and you have this net excitatory effect.Except that actually, you don't know what's going on.You don't have to turn striatum up that much to turn off the glos pallidus.15:00At that point, the indirect pathway has no extra effect whatsoever on the output.So the minus times minus doesn't work anymore if you turn it off completely.Exactly. It's just gone.So there's no longer any competition between two pathways.And what also misses out is,obviously there's a feedback from the sub-flamm nucleus glos pallidus.So one of the big things investigating the Gurney model was this feedback loop.Yeah.And the other key thing in the Gurney model was also the indirect pathway modelis just literally just two pathways.It's just literally one set of arrows and another set of arrows.It doesn't address the question of how do you represent multiple things in this structure.Sure.And as soon as you have more than one thing you need to represent,you need to decide whether you're going to sort of,how you're going to make those things meet up again,whether they're going to follow exactly those two pathwaysor just meet.So if you have action one in the direction indirect pathway,16:01they meet as action one of the output,action two meets as action two of the output or some different combination.And again, so the other thing with the Gurney model was an exploration of,we actually expect that sub-flamm nucleus output doesn't go to a particular action.It goes to all of them because it's output is the axon into the upper nuclei go everywhere.So they don't go to a specific topographic location.So we expect them, no matter what the representation is, they just,go over the whole lot.So, yeah, so those are two of the ways in which it works.And in that realm, the STN would be really important as I understand it,in that model, in the Gurney model to do switching, right?Is that correct?Yeah. So in the Gurney model, certainly the sub-flamm nucleus,that diffuse output is key to its operation in particular,that the ability to turn an already selected action,back off essentially by the fact that if you have new options arriving to choose between,17:03the sub-flamm nucleus activity should then grow and that growth excitation should pull the activitythat put nuclei back up again, away from having shown some selection with this inhibition.And then the input, new inputs arriving should hopefully drive one of those outputs down again.One of the things that was a little bit missing from that paper was a detailed analysis of that process.It just says, so this should happen,but also there's at least lots of scope of what exactly,what sort of balance do you need of the inputs to be able to have enough inhibition to overcome the extra excitation and that kind of thing.So that's where the simulation comes in to do that complete sort of scope that out.Interesting. So, and I guess as far as I understood,the Gurney model then of course was really influential in the field of especially computational neuroscience.And one prominent example that I know of,and that you also said, is that thethethethethethethethethethethethethethethethethethethethethethethethethe thethe thethethethethethetototototototo18:00totototototototototototototototototototoSo I'm going to slightly vague answer here because it's been many years since I've readthe Spelman paper in detail.Sure.Well, see the Spelman paper was 2016, I think, or 2015, something like that, so itwas a science paper on this 1 million plus massive spiking neuron model, in which thegoal was to have a single model which was plausibly brain-like, so it has spiking neuronsconnected together in a big network that had different plasticity rules in a rangeof different regions, one of which was basically like architecture, that could learn and thenperform a range of different cognitive tasks.So I think they tested on eight simulations of different tasks you'd give a human and19:00showed that the model, without any sort of special reprogrammed organisation, could learnall of these tasks and perform them using the exact same architecture.And within that model, because most of the tasks were about performing some kind of response,so some kind of choose left, classic human response task, left or right thing, for eithergoing to be action time stuff or just decision making stuff, so you needed something to choosethe responses.So the basal ganglia component, as I understood it, was the part which was central to allthe sort of the, as we designed originally, the action selection part of the model.And the model they used was literally just a spiking rendition of the Goany model, evenmore literal than the one that we built.We built one which we published in 2006, which had all sorts of extra stuff in it to be moresort of biophysically realistic and show that this dynamics action selection works whileyou can still replicate a whole bunch of like electrophysiological data.20:02But the Elias Smith team literally took the Goany model and replaced the populations withspiking neurons and it just worked.What they added is that they used a lot of data.What they did though was they added synaptic plasticity to the serial cell inputs so thatthey could have it to learn the responses while the rest of the spawn architecture waslearning the structure of the task.So their model was, in a sense, a little bit more advanced.They had it learning away.Yeah, so that was really cool.So in the core of this massive model, there was, as we predicted in the core of the brain,this group of nuclei sitting there constantly learning the correct responses in differentcontexts, given the same architecture for every single different process.So it was a really good task.It really is amazing.I mean, also, as you just said, they literally used it and it worked.So that must feel great, I guess.Would you think the model is still correct?Since you said 2006, you did some additions, you know, now it's 2021.21:00What do you think about the base ganglia?Is that still the main role with action selection?That's good.So the...Yeah.It's certainly...So the model, that original Gurney model, I finished a little retrospective with thinkingabout, of course, over the many years, it has been tweaked and embellished in many,many, many ways to the fact that even the last versions that Kevin has been workingon are sort of quite extensive sort of ornamentation built on top of that original core.And there's a sense in which you have to ask, at what point is it no longer the originalmodel?Is it now something of its own kind?So we see the original model, so we don't think is an accurate depiction of what wenow know about the base ganglia anatomy, hence why we have to embellish the model over andover many years.But of course, then, obviously, that's true of any model, no matter how advanced the model,22:04the model is not all of biological reality.So, but the...Yeah.Yeah.So it's remains that the original Gurney Prescott-Redgrave model is useful as a wayof thinking about how the basic ganglia work because it sets out an entire way of thinking,which we touched on earlier about the subthalamic nucleus role in switching, thinking abouthow it's wired up in order to do selection, still make predictions that are testable.So because if it turns out you can do action switching without subthalamic nucleus in yourbrain at all, then clearly that's wrong.So that would be a good start.So...So, sort of the broader basal ganglia theories, the action selection theory remains as oneof the theories that people are entertaining about what basal ganglia do, particularlyof late, thanks a lot to the work of Josh Dudman in particular, and obviously RobertTurner and others who've done a lot of work on how basal ganglia activity encodes the23:03kinematic variables of movement.They're setting up a strong case for it's not doing action selection.What it's doing is it's setting up the parameters for the action you're doing.And these two look, you know, can look indistinguishable because you still need the actions to be representedindependently if you're going to control the kinematics.You still need to independently represent the movement of your arm from movement ofyour leg because the kinematics is separate.So they are controlled separately.So it looks like you have separate control of these things.But nonetheless, they believe their evidence suggests that you have basal ganglia is therefor this.So they really look at the kinematic parameters of movement, particularly how sort of vigorousyou do the movement as opposed to sort of de novo selection of the thing you're goingto do next.Interesting.Okay.Great.So ah, yeah.Not yet.Completely solved.I guess.Of course.So you recently wrote a book called the spike.24:03I think an epic journey through the brain in 2.1 seconds.That was with Princeton University Press.It's an amazing book.fascinating tour de force journey through the brain and in it we follow a single action potentialfrom the retina via visual to parietal to precentral and so on cortices can you tell usanything about eating cookies in an office environment yeah so the book is written fromthe perspective of obviously you the reader as you say following spikes individual spikes through thebrain from the retina onwards through the early visual system region of the cortex even all theway down to the spine eventually and um i situate the reader in a in a fairly sort of everydayoffice environment um in which the face with a a everyday but sort of non-trivial choice which ismiddle afternoon you're feeling a little peckish you're about to go into a meeting you wantsomething to pick you up and you notice that on the desk in front of yours there is the last cookie25:01in the office cookie box and the ethical dilemma is you're really hungry do you get to take thelast cookie i'm going to go into the last cookie and i'm going to go into the last cookie and i'mgoing to go into the last cookie i guess depending on your culture that's eithera really big ethical dilemma or a small one so in britain that would be a huge ethical dilemma do youtake the last cookie in the office cookie box other cultures i imagine not quite anyway but umthe the whole point of this the setup of the story then was to give um elements that obviously wouldwould feed into your into that thought process of first being able to describe just how your um howyour individual system is going to be and how your um how your you know visual system is going to beand how your you know visual system is going to be picking up all this information around you how it'sresolving the fact that there is a cookie and it's in a box and synergy that's kind of where it isand whether it's moving or not and how far away it is from you um and how all that information getsprocessed now what's happening in the first what 150 200 milliseconds after your retina fallson the uh sees the cookie um and then there's the process of deciding whether you're going to take26:00it or not and having and then in that process trying to remember where people are around youin the office what's who's looking at you where people are going to be looking at you and then youpeople are moving away from you or towards you um about uh so working memory stuff and then decidingwhat's based on evidence around you whether or not you're going to take this cookie and havingfinally decided to take it then the spikes they needed to move your arm and rather than do anythingelse um to reach for the cookie and take it and eat it to give away the ending um but thethe the reason why this ends with two seconds it's this it's a rough estimate of the total processtime with some cogitation in between or how long it's going to take you to you know um see somethingand decide to do something about it uh why 2.1 though is there a reason for the point one no thereason for point one is it was to make it more interesting so yes i figured that yeah it wasspecifically yes so obviously um we're looking at a period of time of we know it's going to take27:01longer than a sort of classic sort of a visual response loop which you know could be a few minutesjust less than a second of seeing something to reaching for it all that sort of decision makingstuff in between um a couple of seconds is pretty typical for you know an everyday action to beenacted so yeah yeah makes sense so in in the book you you explain a lot of things and i really canrecommend it but this podcast is explicitly is is really focused about brain stimulation and youalso seemingly explain how the brain simulation works but you keep it quite brief in the bookso it seems to have something to do with synaptic failure what's thatah yes yeah so glad you picked up that because that's one of my favorite little bits of the bookbut it has to be sure because it's kind of like a little interesting detour for the readerum the general reader who's going to be doing a tour of the brain i'll be wondering why in thischapter in cortex am i reading about the brain stimulation um but let's see so synaptic failureis just the general idea that synapses are not reliable um and it's even most28:05i would wager most people are called neuroscientists which is a pretty broad church right if you go tothe society for neuroscience annual meeting there's 30 000 people who call themselvesneuroscientists many of whom would never have thought about how scientists workbecause it's you know just too much a little time in the day for everything every scale umso synaptic failure then is the fact that um when a spike reaches a synapseto a post-synaptic neuron the release of the transmitter often doesn't happenso you know textbooks were taught spike arrives at the transfer the synapse um the calciumfloods into the synaptic uh the the boot on and that calcium influx forces the vesicle into themembrane increases through the membrane releases the transmitter it locks into the other side blahblah blah what actually happens is the spike turns up and nothing happens um and it happensand sometimes the failure rate is enormous so there are recordings in hippocampus or failure29:01rates of 90 percent so only one in ten of the spikes arriving at a particular silence hippocampuswill cause any effect on the neuron on the other side and the average in uh studies in bits ofcortex is about 75 percent i think obviously when this versus gold internet's as much this monththough if this widespread there's a lot of theorists wondering what the hell it's forbecause being theorists love these sort of questions um and it was uh a nice theory tookhold of it really what's what's great about failure is it's a sort of from a dynamicsperspective is that it's a low pass filter it means that if the spikes come in and out of thein are generated with a particular um pattern that pattern is it lost to the post-dynamic neuronit can't see it because there's so many spikes drop out of the pattern that the pattern is so ifthe um if the spikes were an oscillatory pattern the australian pattern would be filtered out tosome degree because obviously the spikes happen at the peak of this oscillation would be massivelylost um there's the ones at the trough so it would really thin out the oscillation yeah it brings us30:03neatly then to theto these these these these these these these these these these these these these these theseSo the idea is that I'll see in the parkinsonian basal ganglia, a bunch of those structures,particular subclavian nucleus and the Globus pallus are oscillating really strongly.And that oscillatory system is in training the output of the basal ganglia, so it's nowsort of jamming the basal ganglia targets to not be able to be response to their inputsense the sort of Akinesia and Bradykinesia of Parkinson's.And then this thing, then what the rest of the relation does when it's put into the subclaviannucleus is that because it's driving the subclavian nucleus axons so intensely, so this lockstep100 hertz, what actually it's doing is it's causing, because it's so intense, it's causinga massive failure rate at the end of the subclavian nucleus axons.31:00So it's filtering out the input they're actually sending to the basal ganglia.And then to to to to to to to to to to to to to to to to to to to to to to to toto to to to to to to to to to to to to to to to to to to to to to to to to to to toto to to to to to to to to to to to to to to to to to to to to to to to to to to toto to to to to to to to to to to to to to to to to to to to to to to to to to to toto to to to to to to to to to to to to to to to to to to to to to to to to to to toto to to to to to to to to to to to to to to to to to to to to to to to to to to to tothere by and that's probably pathologic we see that more in pd it codes for symptoms and so onand and then with the 130 hertz simulation we tone that down by inducing synaptic failure i guessthat's the is the idea yeah exactly so that they clean that we think of as yes so the um thebursting of individual the sort of individual neuron bursting we see in the animal models ofparkinson's yeah where we assume is what the beta band in the lfp in humans is and then that indeed32:03so that the 130 hertz stimulation is knocking that out by forcing the sort of the static failure tofilter out all this oscillation that's happening so that you no longer entrain particularly the gpino longer can train it to the oscillations that are happening and and um dbs to the gpi would alsowork with thatso that's the yeah good question um so who knows because the so the the theory was worked out herewas from john rubin's team uh i think with working with his albar get um so they were they puttogether this bits of the story so they already had john rubin's team already had a paper abouthow you use uh how you uh how synaptic failure can act as a low-pass filter and because he's abasal ganglia um he's not a basal ganglia so he's not a basal ganglia so he's not a basal gangliaresearcher to i imagine something in his brain went i bet that will work with the informationthey put together this nice little paper and neurobiology of disease which showed that it33:02works but that's specifically for a self-zz� nucleus um dps we can make you can see it makessense and so it'll be a separate modeling question of sure does that actually happen to gp becausebecause one of the questions with gpidbs which foxes a lot of these ginga researchers like meis if the gpi is the outpour of the basal ganglia we understand something nucleus dbs work becauseit restores the output to these these these these these these these these these these these theseoutput structure to be able to do what it does.But if you put the DBS stimulator in GPI and just entrain that to 130 hertz,how does anything at the other end respond when you've entrained the outputstructure you thought you were returning to normal?So one guess would indeed be that what it's doing is it's simply removing GPI'sinfluence completely from thalamus by having a synaptic failure perhaps.And then that's,it's just restoring the ability of the rest of the brain to work rather thanrestoring the base of ganglia function of any kind.And that would make sense because a lesion to GPI also works, right?So, so yeah, it is, I, I, I,34:01I guess I personally agree with you that there must be something at aoscillatory level that toning down pathological signals is,is key.And that is probably gone possible with different mechanisms, but yeah.Really interesting.So maybe going back to the book and,and synaptic failure,you also talk about type one and type two dark neurons.What are those?Yeah. So these are,so these are,you can start with one if you want.They're very different.So this is a dark neurons are the general idea that the neurons in the brainare a lot less active than we think they are.So historically,we also,we recorded individual neurons in the brain by lowering thin slivers ofmetals, thin electrodes down into,into cortex.35:00And I'll see you doing that blindly.So the only reason,you know,like you have recorded from an individual neuron is because you can see thespikes on the oscilloscope or here on the lab speakers.And you've been at that.That's how it's been done since the thirties and the original sort ofrecordings.But that of course means that you can only record neurons that are firingspikes.So it looks like all neurons are firing spikes,because the only neurons you're recording from other ones firing spikes.When you start recording from neurons,just generally just unbiasedly recording neurons,it turns out that many,many neurons aren't firing any spikes at all for much of the time that you'relooking at them.And that's what we're calling the dark neurons or at least the type one darkneurons.So generally when I assume I've written proofs about saying dark neurons,I mean this,this set to a Bailey active I'll say they raise all kinds of queries,simple ones like, well,what are they for?If we,we imagine the brain is,you know,lit up with activity,we see,they're looking at FMI scanner.36:00We can see big chunks of the,of the sort of the blood oxygen demands,these big chunks of brain.But it actually turns out that in that chunk,there's only a handful of neurons really doing the work.And most of them are just not sending any spikes at all.So,and I've seen the book of speculated a bunch of ideas about why they wouldexist.So simplest one being that obviously when we record these neurons,neurons in our experiments,we only record them from,you know,a half an hour,an hour,two hours at a time,a tiny fraction of their lifetime.And we give them really simple things to do,either show them some pictures or we get an animal that they're sitting into do really simple tasks.For which case we're just not exercising them in the,in the regime that they would actually respond.That's one option.The type two data neurons are kind of the,the,the sort of even more slightly difficult to understand cousins.So off the subset of neurons that are active,they divide nearly into ones that responds to the thing that you're,37:00what's happening in the world.So this response to the stimuli,they're responding to the,the movement,whatever those are the neurons that were analyzed in the papers.Yeah.And then there are the neurons that are active.We can definitely pick them up,but they don't respond to the stuff that you're doing.So those in the book,I call them type two,dark neurons on the grounds that again,to the outside world,they would seem to be invisible because they don't talk about them.Right.They,they just don't fit their agenda.So they,they record them.They don't make sense.And then they don't talk about it.Right.So particularly there was,you pick up almost any sort of open an issue of journal of neurophysiologyfrom like the late nineties,almost every paper,the opening of the results would say,so we did,we recorded 150 neurons in the,in the rats while they did press the lever or whatever they were doing.All those 150,80 were tuned to the task.And we were going to analyze them.And this paper,yes.You go,what about the other 70?What were they?And so those,those sort of those,the other type,38:00type two,not type two,dynarons have been,I've been there forever.We've known about them,but they're not analyzed.I wanted the big thing has happened in sort of recent sort of particularly last decade of systems,neuroscience,and computational neuroscience is the looking at neurons as a population and understanding that it doesn't really matter where the individual neuron is seemingly tuned to something or not the population.You can,you can read out stuff just fine.You can read out choice of going left or right.You can read out aspects of the stimulus.You can read out the task phase the animal was in,even if the individual neurons are passing no statistical test whatsoever for being tuned to this stuff.Because all that might matter to the brain is the fact that there are enough neurons bearing their activity on this particular occasion that you can tell the difference.Also,like from the reading,the how to build your brain,the brain book by Elliot Smith.I learned that.And I think you can then run their,their analysis software as well.39:01And basically encoding a variable in a,in a number of hundred neurons is much easier than in a single neuron,right?So,so he has these like code examples where,where if you just want to encode a sine wave in with hundred neurons,it's quite easy and you get can reconstructed really well,but with a single neuron,it's,it's more complex,of course.So,so is that the same,context that,you know,only the legion of,of neurons could encode well enough?Or do you think it's just the way the brain works that we need multiple neurons?Yeah,I think that's,those are sort of,there are parallel arguments why you have many neurons.One,so the,yes,there are arguments to be made for the fact that you need a certain level of representation to be able to encode the things you want to be able to encode.So it means you need,need many neurons.And there's the argument,for example,the mixed selectivity arguments,sort of the Rigotti and the Panzeri arguments about the fact that there are parts of the brain,40:04in that case prefrontal cortex,where you deliberately want to make your,your activity high dimensional because you're trying to combine things non linearly.And if we do that in a few neurons,then the signals are really hard to decipher.But if you take these nonlinear combinations and you represent them in this really high dimensional space,you spread them across many,many neurons,um,then they actually can be decoded really easily because they're in high dimensional space.You just put a,put a plane between them,simple flat plane,and you can just decode one from the other.Um,so there,there are lots of good reasons why you want to have lots of neurons encode stuff rather than individual neurons.In the book,they were kind of talking about the,the flip side,which is,um,the fact that if we believe,uh,with the brain is,uh,the brain is a noisy thing and we know lots of neurons,both don't fire very much.And when they do fire the spikes fail.So how do you encode things robustly,41:01um,against all this,this sort of stochasticity?And the answer is you're going to in lots of neurons.They're almost no matter how simple it is.Um,so from that perspective,then thick is more of a question of,um,uh,it's not off the complexity of thing that you're encoding.Um,but off,uh,it's not about,uh,you know,many neurons supposed to wonder run,but whether or not,um,uh,there was any such,there's more question of any such thing as neural encoding at all at the single neuron level.And that actually the brain just easy encoding stuff all the time at sort of population level.And it just so happens that,um,because you have so many neurons,of course,some of them seem to respond reliably to particular features.So they get called edge detectors or they get called play cells or whatever.Makes sense.Interesting.So,so another small,uh,detour in your book,you jump from Regina directly to the primary visual cortex,42:01mischievously skipping the lateral geniculate nucleus.But,um,indeed the first thing I learned from you actually on Twitter is that,um,I think you posted this,uh,while back December,2018,you placed the PDF on your,of your tattered copy of Wishaw's classical book chapter,the big,the court,you can't read from 1990 there.Um,basically you asked what can rats do without the cortex?And you said a lot,and then there was a whole threat and,um,took me a while to read the original wish or,um,PDF,but I learned a lot.So,so can you maybe talk a bit about that?Is the cortex that important?Even,right.It's a good question.Yes.Um,so coming from a basal ganglia group,when I was trained,um,obviously we were,they were big fans of this,the course got wrapped work showing that cortex was not particularly necessary.So you can leave it all to the basal ganglia to do the hard work.43:01Um,so yeah,so that it's,it's,uh,one reason I pulled that out is because it's a,it's a huge body of work from the eighties and early nineties in which there has never been a systematic,any kind of review written of it,except for that one book chapter of a book that's out of print.Um,and isn't available as well as I could tell on any sort of,you know,yeah,any online system.Um,uh,and I,I was thinking about it,I think because I just read Randy Bruno's paper on where they were,they were training mice to do a,uh,I think a poll detection task with their whiskers.Um,they lesioned off the whole of the barrel cortex and it could still do the task.So,okay.So I can take away the whole of the region of cortex represents the whisker.How on earth are these rats learning this task?And the answer of course is they're doing all subcortically.The,the whisker information is going into the striatum,it's going to subcortically.So,you know,since the superior clitoris just as it is up to cortex and if all you're askingit to do is discriminate two simple things or hit a pole,then that's fine.44:00Um,and though in the wish or chapter,there was a synthesis of all his and Brian Cole and others work on,you know,lots and lots of studies of what rats can do without their cortex.Um,and if I remember,remember Riley,the sort of the review basically says almost everything is fine.It's an extended,they,they,you know,sent,they tested,they did a lot of work on the cortex and stuff based.There's the kind of body of work that could really be done beautifully redone now,particularly when we have things like deep lab cuts.So we can really quantify the behavior much more,you know,um,in much more detail than their sort of observations of,of what's still gonna be fairly gross,you know,behavioral changes and stuff.Um,there,but maybe to,to name a few things they can mate,they can raise pups,right.They can nurture pups.They,um,walk on a treadmill and they do a lot of things without cortex.So stay back.Yeah,absolutely.Um,indeed.So the,I seem to remember the,the main things that they was struggling with was,uh,see appropriate,45:00um,sort of,uh,interaction to some conspecifics.So some of those,some of the social stuff was occasionally appropriately aggressive and stuff.And in particular,I think they concentrate a lot in that book chapter was the problem to have with trimming their nails.So that too,it's like a figure of that of a rat with really big overgrown nails because they can't,they can't groom,groom the nails properly.Um,which was the suggestion that obviously you've got the perfect fine gross motor control,but you don't have,you've lost some fine motor control and that's the most obvious sign of it.So,um,so one wonders,for example,or they could run to find the treadmill.If you're going to look at their actual grip,which they probably will have issues with slipping.I imagine.Yes.And they wrote a cortex.Um,but yes,yeah.So they put it in terms of the things you need to do to survive.They don't seem to need cortex,which as you say,Oh,aren't raised the question of what do you need cortex for,for the nails?Yeah.For trimming nails.46:00I think that's,that's,do we think that's,that might be something in the field of neuroscience that we are too much cortex,Torbenists,and that is not a well enough known fact that I'm not,you know,of course,cortex is not useless and used for a lot of things,but,but still,I think a lot of people really think of reach of function of brain,being localized,this or that cortex,um,region,and they might miss a lot.That's,you know,that it would even work without that region.As you say,I said with the barrel cortex,do you think that's a problem or,um,yes,the short answer.Yeah.So I've,I've had the advantage of,of,as I said,I've been trained from a group that don't work in cortex at all.And then moving to working on cortex,um,quite a lot.And,um,obviously you can,you know,we can see that there are various historical reasons why cortex is,is,is dominates thinking.So obviously one is simply that,um,47:01we know from various,you know,uh,very ancient,uh,lesion studies in humans,the various reasons of cortex are really important and various things.And so back to Bronco and Veronica,and so on.Yeah.Um,so we,we have this view that a lot of what makes us uniquely human is centered inthe cortex.So we want to understand the cortex.So when we go to the cortex of,of animals to understand the cortex of humans,that's a slight disparity of course.Sure.Um,and then of course there's simply the fact that the cortex is the easiest bitto record from.So just go through the top,um,which means they didn't have a,that's correct.So something of a kind of,and another bias in how we,how we gather data.Um,so obviously that,that the,the fact that the sort of the visual cortex is the most,so most research part of the brain systems,general science.Yeah.Um,is because of those two reasons.It's because we're humans or are visually driven animals.So we understand how our visual system works and it's the easiest bit ofcortex to record from.48:00It's just there at the back,which is pretty electric on top.There it is.Um,but then as you say that that's all makes sense.Okay,great.But also that means that you,that people tend to really,um,uh,put almost everything into cortex of cortex does,you know,it does all decision making.It does all,um,you know,value judgment.It does all the things.It does all the things.Which is particularly bizarre to people who work on things like Parkinson's disease and go pretty sure.Cortex doesn't do the things you said.Um,cause you can just put a bunch of disorders where cortex is absolutely fine,but the things are completely going wrong.So then,yeah,yeah.And hypothalamus,uh,it's important,I guess if you,if you're losing that,you die that,that we know.Right.So I,I,I think this could maybe lead,hopefully lead us to the last topic,um,um,which is focusing on your recent paper,um,on the strong and weak principles of neural dimension reduction published in this amazing new journal and neurons,49:04behavior,data analysis,and theory.Can you briefly summarize what these two principles would be or what you mean by that?Yeah,sure.So as we touched on,so in the last two decades,system neuroscience has been recording,um,more and more neurons simultaneously.So,uh,we're now up to the ability to record routinely record hundreds of neurons at the same time.Um,we've discussed examples already where we can record thousands of neurons at the same time.And in back in February this year,um,the preprint from a group in Rockefeller announced they could record up to a million simultaneous neurons,individual neurons in the cortex of a mouse.Um,with some extremely.Difficult to reproduce,uh,kids.So I think calcium imaging,of course,um,so a genetically expressed calcium sensor across all the neurons in cortex and lots and lots of clever tricks to put the planes of lights,50:03uh,in all the way,scanning it as fast as possible across multiple planes,lots of different places going off,uh,just kind of tech demonstration to go.It is possible to do this.I'll do that raises the question then across why would you want to do that?Um,scientific questions that can follow,but so the ball,see the more and more neurons that we get the higher and higher dimensional data sets become.So even with a thousand neurons,you've got a thousand time series of neurons responding to things in the world.It's a thousand dimensional data set just in the number of neurons.Um,so the first thing that we reach for then to understand this is dimension reduction of some form and the weak and strong principles is the is the question of when we reach with the measure reduction.Is it that because we think it's just a tool,it's the weak principle is that it's just a tool.It's just the thing we use to make sense of the data.Um,that helps us just grasp what it is is there to make the data more,51:01more handleable,right?As a,as a research tool.So we can visualize it so we can analyze it in slow dimensional space.It makes sense of it.Um,so,and that perhaps that works because,uh,we're only recording these neurons over a little short period of their own of their lifespan.So they're,they're,they're responding in a low dimensional space.So we can visualize it in a low dimensional kind of way,um,for the particular task that we're giving it.The strong principle is the,um,is the view that this dimension reduction applied to these neurons is not just tall.It's actually showing us the level of which the brain operates.The brain is actually operating as a whole series of low dimensional dynamical systems or coupled together.And what the direction reduction is showing us is that low dimensional signal.That is the thing that's doing the encoding.The thing that's been passed from region to region.Um,rather than the individual spikes,individual neurons,it's the level of which it's operating.Um,so those are the,yeah,the two principles.And the idea was to lay out this just as put it in sort of in writing or going,uh,52:00you're making this choice implicitly whenever you're doing your paper.Is this what you mean?Because the first question for people to think about,do you mean it's a tool?Do you mean it's what you think the brain does?Um,and then to talk about,um,in the,in the paper sort of evidence for,and sort of against the strong principle,given that the weak principle would kind of be end up being the default position,right?So you can,uh,we can always believe it's useful tool.No problem.We can all agree on that,but is it something more and something more?These are a stronger debate.Do you have a gut feeling?Is it,is it,is the strong principle true or not?Or is that like,do you want to lay out some pros and cons for us?Yeah.So the most obvious,uh,because myself is pro,um,is that it's,uh,that point of view makes sense of a whole lot of data that we have about how the brainworks.So particularly in most of the regions that we can,um,do these low dimensional projections of activity and from that low dimensional projection,53:01we can read out everything we want to know about the movement that's happening.Um,and it solves a whole bunch of problems about how you,you know,about how individual neurons can encode things.Can we ask all those questions?Just go away.How do,how is the individual neurons that fail and send spikes and stuff?Okay.Well,that's not the,those,those aren't interesting questions.It's how this whole population encodes this simple low dimensional system,which means that if individual neurons fail or don't fire properly or fire,well,too much,it doesn't matter because they not affecting in any meaningful way,the low dimensional signal in the population.So it explains how you can have the exact same system generate exact same movement indifferent animals where the individual spiking activity looks different because the underlying dynamics are the same.Okay.That's slow dimensional system.Um,so it explains a whole bunch of stuff.Uh,one of the cons though is that,54:00um,there are systems for which,for example,um,low dimensional activity doesn't seem to make a lot of sense.So most obviously in the sort of early visual courtesies that we have,I have no doubt also in some of the sensory reasons and in auditory regions,um,in which we have compelling arguments about why instead you would have a high dimensionalsparse code because any kind of low dimensional code requires that you have correlated activitybetween the neurons.That is the thing that's creating that low dimensional signal.But that correlated activity is,um,from an information perspective redundant.So why would you just have all these neurons sending the spikes at the same time?If you could get away with having just a few neurons sending a few spikes because the energyrequirements is so much less.Of course.Yeah.Um,so that's the,that's the big,that's the one of the big cons against that point of view.Um,yes.So,yeah.So,so I think one thing exactly in that regard that I personally missed from the paper is55:00that you focus so much on which of the two principles is true,how the brain does that,but you seemingly ignore the where it does so.Right.So for me,I,to to to to to to to to to to to to to to to to to to to to to to to to to to toare always the same size, but if you move away from cortex, the receptive field of each one isbigger, right? So you have more cortex, more stratum to the same neuron. And then you goback through the thalamus back up and it spreads out again. So you, and similar way could be truefor, let's say V1 versus V4, right? As you, and I want to talk about that as well. In the last56:05chapter of the book, you also talk about that. So could it be that just, you know, some areasuse, let's say the strong principle more than others, or like V1 would have less,less compression in it than V4 would have or motor cortex versus STN?Yeah, I think, I think so. So yeah, obviously I end that paper with the, yeah, by hedging my bets,by pointing out that, yes, see, there are reasons because we have, we have good reasons to believethat both can be at play, but they seem to correspond to different things, differentreasons of the brain.How to do that. Perhaps indeed there are reasons of the brain that conform to the strong principle.They do use low dimensional dynamics, what they do. And there are reasons of the brain that,that as you say, clearly expand their input. So we have, you know, as you say, we have greatevidence that V1 dramatically expand its representation from LGN. And to do so then57:00has a sparse code to cope with the fact that it's massively expanded it. So then that would,would correspond to something that's not the strong principle to therefore,the dimension reduction applied to it would be, would be the weak principle.Yeah.And then the big question then becomes, then how does one talk to the other? How do we get from,from one to the other? And as you say, there is a whole, I guess I didn't talk about it at all,but there was a whole interesting thing about that. The, the, the ideas of, is it going to bedoing some kind of dimension reduction, which we know intuitively because of the scaling of thesize of the nuclei around from the rats, you know, rats, it goes from what 17 million cortical andneurons are 3 million striatum to about 21,000 reticulata neurons. So many orders of magnitude,and it gets expanded out again at the other end. Yes. So a whole interesting question iscompletely untouched is yes. Where does the sort of the translation happen on how do you, yeah.Yeah. I, I, I want to go back to Chris Eliasmith in this context and in his book,58:07How to Build a Brain, he explains this semantic point.Which he argues are a fundamental principle of how cognitive architectures could be built.And the fundamental principle is that they are constructs that work at both low dimensionaland high dimensional states. So he, I think he, he calls it dereferencing. So you can calculatewith them on a low dimensional space, but if needed, the cognitive architecture could,could dereference them and expand their information.Yeah.So he has good, good ideas, like good, good examples about that, where, you know,sometimes you can make a decision fast, but then potentially you, you want to dereference,and, and look at the details more to some degree. I don't know if, if, if that could map to anydegree on, on something like that, where you know, it's sometimes helpful to make computations in a59:04low dimensional space, such as in the STN of the same data, because maybe, maybe they are justbetter to handle.And sometimes, but you need the whole information state that's maybe more in the cortex.So, yeah, that's really interesting idea. Yes. I've forgotten the semantic pointer idea,because I know it's supposed to be underlying the SPORM architecture we just discussed earlier.Yeah.But yes, I guess it's kind of related to the sort of the mixed selectivity idea that you deliberatelyprojecting this stuff up into a high dimensional space, so that you can do stuff more easily with it.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.01:00:00Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.Yeah.activity in pre-motor cortex where we definitely don't have it in V1. So is it that it's possiblein pre-motor cortex for it to move between a purely low dimensional and a sort of more highdimensional thing, depending on what you're doing? One can imagine that you might wantsome more sort of high dimensional control over finger movement than you do over the arm movement.Yes. Yeah.For example. And I know that, yeah, so people are starting to really look atfinger movement coding inside motor cortex.Didn't you even write in book that that's something exclusive to primates,that you have a direct cortical input to hand movements because of the finger?That's right. I think that's, yeah. So what Roger Lemon and others that you'vedone, as far as we know, primates are the only animals that have a direct projection from theprimary motor cortex to the actual spinal motor neurons that connect to the fingers,01:01:03as opposed to the interneurons that then control, coordinate the motor neurons to produce thegross motor cortex.So that gives them, yes, direct control over individual muscles, whether, yeah.Yeah.Yeah. But maybe as the very last point, it's related to what we discussed before.And I really love that semi last chapter of the book, you write that the intrinsic activity,let's speak about V1 again, V1 going up to V2, V4 and prefrontal cortex and temporal lobe, where theidea would be that, you know, the prefrontal cortex is going up to V2, V4, and prefrontal cortex andprefrontal cortex to V3 to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to01:02:07progressive sensors, they're combined together into corners and long edges in V2, and theyare combined into outlines of things in V4 and into textures by combining lots of linestogether to make a texture.And then further up in IET, they get turned into objects from the outlines and the colorsand stuff all put together.So yeah, this hierarchical process is going up.But we know that for various recordings, the activity in these regions is enormous andongoing, whether or not you're looking at something.And there has been some various bits of work strongly suggesting that the activity whenyou're looking at basically nothing, a gray screen, or even your eyes closed, is, at leastin animals, is very, very similar to the activity when their eyes are open, which suggests thatmost of the activity is looking at stuff.So most of the activity is actually not then encoding stuff that's coming in, but also01:03:01is doing some ongoing processing.And the ongoing processing, the best guess is what it's doing.It's just simply predicting the features that are going to be there in the world thatyou're looking at.And the more advanced idea is that the activity, because it's hierarchy going up, is a hierarchygoing down too.So what's happening is that each layer is predicting what the layer below it shouldbe sending it.So V2 should be predicting the elementary edges that V1 should be seeing from the factthat it's predicting these lines.V4 should be predicting the lines.And V5 should be predicting the corners that V2 should be sending it because it should beseeing the outlines of these objects and so on up, so down the hierarchy.So the idea then is that the spontaneous, the ongoing activity in these regions, thesejust these predictions, because obviously our experience of the visual world is continuous,that it makes more sense that the system simply fills in things that are different and changed01:04:02or wrong than it has to fill in the whole visual world every time that we...Yes.Our brain refreshes or however we want to think of it.And these predictive processing accounts mean that that's really simple.You simply now, instead of thinking of this bottom up information coming from visual cortexas this complete picture of the world, what it actually is, is then just the differencebetween what's coming down and what's coming up from the retina.Yes.And what's being passed forward is the thing that needs to be tweaked in the predictions.And then you just continue to go on this loop with the ongoing activity.Yeah.And it's probably, it's a loop, it's an oscillation likely in reality.And so I sometimes wonder, are these arrows that we sometimes draw on these diagrams,are they even...Maybe they are confusing to people new to the field because it should...They probably aren't.So the way I see it after reading that is really that all of these regions seem to oscillate.They basically synchronize whatever their state would be with each other.01:05:05Right?So let's say V4 with an electrode, V1 would change and the other way around.Is that correct?That they somehow, they keep, they have neural networks wired up in a way that they needto add up.Wherever you change it, it would change.Yeah.So it's the...Indeed, there's a sense in which it makes more sense to think of the visual system asa kind of holistic thing, which is a continuous processing unit.But it's not.It's not.It's not.It's not.Nonetheless to touch on the book, it is true.We have quite strong evidence that there is a strong feedforward processing path in thevisual system.So we have really reason to evidence to this to different sources.Adam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam DewaieaAdam Dewaiea Adam Dewaiea01:06:00Adam Dewaiea Adam DewaieaAdam Dewaiea Adam Dewaiea Adam Dewaieaand look at the activity in the last layer of that deep neural network,which is going to be your IT region,and you go and record from that,and you go and record in IT,and the neural responses look more or less the same,then you perturb the objects you're giving the neural networkwithout retraining it,and the responses perturb in the output layerthe same as they perturb in the IT when you give it to the monkeys.So you have this purely free-forward architectureto be able to sort of recapitulate some of the responses.And clearly those responses are to the input that's being given,so obviously the input is quite free-forward.And then we also have the lovely recent workfrom the Allen Brain Institute,where they've recorded hundreds of thousands of neuronsnow in the visual systems of the mice,from Miles V1 forward,using both calcium imaging and neural pixels probesto get the spike trains.And in both of those cases,they find quite a nice hierarchy01:07:00of the hierarchical structure to the dynamicsin the visual system when showing a thing.So they give a strong sense of this sort of free-forward process.One reason why that might be, of course,is that when we have this free-forward and feedback pathways,they're actually going from different layers.So there is a clear sort of free-forward loop going on,which is feedback is then laid on top of.Yeah.And they are...where exactly they meet in each cortical regionis a little bit less obvious.Sure.So, yes.So it's good to...So in terms of our thinking about how the visual system works,we still get quite far with this sort of view of this free-forward system.And then to think about what information is actually sentby that free-forward system is probably thenwhere we need to think about the feedback being added to it.So that makes a lot of sense.But if we close our eyes,and we...01:08:00if we record from V1,there shouldn't be coming in much sensible information from the eyes and LGN.So, but we would, I think, in babies, we wouldn't find much.But in, as you say, I think in adults, we would find a lot of informationand that could still be really proactive information from top-down sources.Yeah, exactly.So that is the current sort of, I guess, grand theory that marries togetherlots of electrovisory recordings of what happens in the brain,Yeah.of what happens in the brain,Yeah.whether you're watching V1, whether you're not looking at stuff,and theories of how you do inference in your visual system.Yeah.Of that, in fact, you need this top-down signal to be able to inferthe information that's in the world.And wouldn't you think if you then, you know, take instead of showing pictures,you would take an electrode into IT,and that's your feed-forward stream going down to V1,you could record V1 and find whatever,like something that responds to that stimulation in IT.01:09:00Yeah.Yeah.Yeah.You should.I'm trying to record.I think someone pointed me to a paper that's actually started doing that recently.So yes, indeed, these feedback accounts indeed suggest that if you strongly perturb the correct layerof a top-level visual cortex area, you should be able to read it out downstream.So in this case, if you manage to strongly stimulate something up in layer 2, 3,then hopefully you'll be able to read it out.Yes.Yes.Yes.Great.All right.This was really fascinating.So I think a lot of these topics to some degree converge to, right,the Basal Ganglia as a compression system, action selection system,but also the streams or like these strong and weak principlesthat might be more true depending on the region,potentially, or even at least the dimensionality.Probably strong principle is true everywhere, but01:10:00how much dimensionality is reduced might be different per region, actually.So thank you so much once more for taking the time.And yeah, I think this was really interesting for everyone.You're welcome.Thank you very much.And to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to to
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